Thread and Executor Service Assignment

credit for this assignment: Finn Voichick and Dennis Cosgrove

Building On Previous Exercises

Be sure to complete the Half & Half and Coarsening exercises first.

Thread

While we strive to make CSE 231 generally applicable across libraries and languages, it would be madness to have a parallel programming class in Java and not have students know how to create a Thread, start it, and join it. In this section of the lab, you will do just that.

Code To Use

MidpointUtils.calculateMidpoint(a,b)

interface ThreadFactory

newThread

class Thread

constructor

start

join

As always, the wiki's reference page can be of help.

Code To Implement

ThreadHalfAndHalfNucleobaseCounter

class:	ThreadHalfAndHalfNucleobaseCounter.java
methods:	count
package:	count.exercise
source folder:	student/src/main/java

count

method: public int count(byte[] chromosome, Nucleobase targetNucleobase) (parallel implementation required)

Executors

Code To Use

interface ExecutorService

submit(task)

invokeAll(tasks)

interface Future

get()

NucleobaseUtils

countRange(chromosome, targetNucleobase, min, maxExclusive)

Ranges

slice​(min, maxExclusive, numRanges).

As always, the wiki's reference page can be of help.

Code To Implement

ExecutorHalfAndHalfNucleobaseCounter

class:	ExecutorHalfAndHalfNucleobaseCounter.java
methods:	constructor executorService count
package:	count.exercise
source folder:	student/src/main/java

count

method: public int count(byte[] chromosome, Nucleobase targetNucleobase) (parallel implementation required)

ExecutorCoarseningNucleobaseCounter

class:	ExecutorCoarseningNucleobaseCounter.java
methods:	constructor executorService numRanges count
package:	count.exercise
source folder:	student/src/main/java

count

method: public int count(byte[] chromosome, Nucleobase targetNucleobase) (parallel implementation required)

Slice the chromosome up and use invokeAll(tasks) to count the targetNucleobase in parallel.

Correctness

class:	__ThreadAndExecutorTestSuite.java
package:	count.exercise
source folder:	testing/src/test/java

Pledge, Acknowledgments, Citations

file:

thread-and-executor-pledge-acknowledgments-citations.txt

More info about the Honor Pledge